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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clpp, ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
Sequence ID:NM_017393
Entrez Gene ID:53895
Ensembl ID:ENSMUSG00000002660

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 D|17 34.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 56990308 - 56996187

NM_017393 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12505712968657129935
2513225713002857130099
3234195713071657130812
4206075713224857132435
6087135713287057132975
71412055713530057135791

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487489Full LengthBC001998caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059089  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017393 NP_059089 O88696 EC 3.4.21.92 CLP_protease

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC001998 AAH01998 O88696 EC 3.4.21.92
AK004024 BAB23132 O88696 EC 3.4.21.92
AK002238 BAC24984 Q8CF81  
AK145765 BAE26636 O88696 EC 3.4.21.92
AK147719 BAE28093 Q3UGW4  
AK168053 BAE40033 O88696 EC 3.4.21.92
AJ005253 CAA06443 O88696 EC 3.4.21.92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clpp NP_059089 R.norvegicus Clpp 301117   XP_217313 93
H.sapiens CLPP 8192 Gene Info NP_006003 87
A.gambiae AgaP_AGAP009019 1279976   XP_319765 74
D.melanogaster CG5045 34402   NP_609388 71
C.elegans clpp-1 174594   NP_496215 65
A.thaliana NCLPP7 832378   NP_568427 60
N.crassa NCU04578 3874426   XP_958279 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)