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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pls3, plastin 3 (T-isoform)
Sequence ID:NM_001166453
NM_001166454
NM_145629
Entrez Gene ID:102866
Ensembl ID:ENSMUSG00000016382

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A7.3|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 75786766 - 75826945

 Exon Info From UCSC:
NM_001166453
NM_001166454
NM_145629

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3495462Full LengthBC005459plastin 3 (T-isoform)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663604  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166453 NP_001159925    
NM_001166454 NP_001159926    
NM_145629 NP_663604 Q99K51 efhand
CH

Related Sequences

 
mRNAGenPeptSwissProt
BC005459 AAH05459 Q99K51
AB182243 BAD23918 Q99K51
AK146087 BAE26890 Q3UKB1
AK146455 BAE27186 Q3UJG9
AK160501 BAE35826 Q99K51

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pls3 NP_001159925 R.norvegicus Pls3 81748   NP_112346 99
H.sapiens PLS3 5358 Gene Info NP_001129497 99
A.thaliana AT5G48460 834901   NP_199657 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)