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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Afg3l1, AFG3(ATPase family gene 3)-like 1 (yeast)
Sequence ID:NM_054070
NR_028260
Entrez Gene ID:114896
Ensembl ID:ENSMUSG00000031967

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1-E2|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 123477920 - 123502177

 Exon Info From UCSC:
NM_054070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6821746Full LengthBC056978AFG3(ATPase family gene 3)-like 1 (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_473411  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_054070 NP_473411 Q920A7 AAA
Peptidase_M41
FtsH_ext

Related Sequences

 
mRNAGenPeptSwissProt
BC056978 AAH56978 Q920A7
AF329695 AAK66971 Q920A7
AK012394 BAB28211 Q920A7
AK159647 BAE35259 Q920A7
AK167964 BAE39961 Q920A7
AK168244 BAE40194 Q920A7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Afg3l1 NP_473411 R.norvegicus Afg3l1 361436   NP_001101926 96
S.cerevisiae AFG3 856737   NP_010933 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)