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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mrps18a, mitochondrial ribosomal protein S18A
Sequence ID:NM_026768
Entrez Gene ID:68565
Ensembl ID:ENSMUSG00000023967

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 C|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46110994 - 46128759

NM_026768 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11264624795246248077
1271584625488846254919
1592664625967246259779
2673904626223846262361
3914604626259146262660
4618644626545346265856

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6817698Full LengthBC058959mitochondrial ribosomal protein S18A
5346685IncompleteBC025456mitochondrial ribosomal protein S18A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081044  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026768 NP_081044 Q5U5I3 Ribosomal_S18

Related Sequences

 
mRNAGenPeptSwissProt
BC025456 AAH25456 Q99N85
BC058959 AAH58959 Q5U5I3
AK003444 BAB22794 Q99N85
Q5U5I3
AB049953 BAB41006 Q99N85
AK028226 BAC25825 Q5U5I3
AK172171 BAE42864 Q5U5I3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrps18a NP_081044 R.norvegicus Mrps18a 301249   NP_942051 93
H.sapiens MRPS18A 55168 Gene Info NP_060605 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)