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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mavs, mitochondrial antiviral signaling protein
Sequence ID:NM_001206382
NM_001206383
NM_001206385
NM_144888
Entrez Gene ID:228607
Ensembl ID:ENSMUSG00000037523

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 131234066 - 131248022

Transcript StartTranscript EndChromosomal Start Chromosomal End
1218131059873131060090
219393131064471131064645
394571131066050131066227
572741131067615131067784
742895131068854131069007
8961362131070938131071404
13633023131072099131073759

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4190175Full LengthBC020006RIKEN cDNA D430028G21 gene
5100990Full LengthBC025825RIKEN cDNA D430028G21 gene
5123637Full LengthBC031352RIKEN cDNA D430028G21 gene
5361522Full LengthBC037391RIKEN cDNA D430028G21 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001206382 NP_001193311    
NM_001206383 NP_001193312    
NM_001206385 NP_001193314    
NM_144888 NP_659137 Q8VCF0  

Related Sequences

 
mRNAGenPeptSwissProt
BC020006 AAH20006 Q8VCF0
BC025825 AAH25825 Q8VCF0
BC031352 AAH31352 Q8VCF0
BC037391 AAH37391 Q8VCF0
DQ174271 AAZ80418 Q8VCF0
DQ167127 ABA54891 Q8VCF0
AK028421 BAC25940 Q8VCF0
AK153748 BAE32168 Q3U5B1
AX775773 CAE11586  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mavs NP_659137 R.norvegicus Mavs 311430   NP_001005556 81
H.sapiens MAVS 57506 Gene Info NP_065797 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)