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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr2e1, nuclear receptor subfamily 2, group E, member 1
Sequence ID:NM_152229
Entrez Gene ID:21907
Ensembl ID:ENSMUSG00000019803

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B2|10 25.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 42561969 - 42583590

NM_152229 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115564228177642283331
155716624228729442287399
166318124228764142287790
181319094228817842288274
191020564229117842291324
205722924229255142292786
229323804229416142294248
238125264229797142298116
252732334230268742303393

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6401770Full LengthBC057104nuclear receptor subfamily 2, group E, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689415  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152229 NP_689415 Q64104
Q78ZM1
Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
S77482 AAB34090 Q64104
BC057104 AAH57104 Q64104
Q78ZM1
AK132201 BAE21029 Q64104
Q78ZM1
AK135694 BAE22615 Q3UXE8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr2e1 NP_689415 H.sapiens NR2E1 7101 Gene Info NP_003260 99
D.melanogaster dsf 33823   NP_477140 54
C.elegans nhr-67 178024   NP_502094 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)