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Gene Info

Gene Information For:Mm. Lsm6, LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Sequence ID:NM_001191004
NM_030145
Entrez Gene ID:78651
Ensembl ID:ENSMUSG00000031683

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 78808036 - 78810210

 Exon Info From UCSC:
NM_001191004
NM_030145

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3372313Full LengthBC098230LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
5370660Full LengthBC030427LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
30936207Full LengthBC099484LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001191004 NP_001177933    
NM_030145 NP_084421    

Related Sequences

 
mRNAGenPeptSwissProt
BC030427 AAH30427 Q542U7
P62313
BC098230 AAH98230 Q542U7
P62313
BC099484 AAH99484 Q542U7
P62313
AK019126 BAB31555 Q542U7
P62313
AK078392 BAC37251 Q542U7
P62313
AK141884 BAE24870 Q542U7
P62313
AK158236 BAE34418 Q542U7
P62313
AK161686 BAE36530 Q542U7
P62313

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lsm6 NP_084421 H.sapiens LSM6 11157 Gene Info NP_009011 100
R.norvegicus Lsm6 498934   NP_001119557 100
R.norvegicus LOC100360750 100360750   XP_002728048 100
A.thaliana AT3G59810 825150   NP_191540 90
A.gambiae AgaP_AGAP005314 1276023   XP_315329 88
D.melanogaster CG9344 37372   NP_611528 86
A.thaliana AT2G43810 818985   NP_001078052 85
C.elegans lsm-6 190601   NP_490883 81
S.pombe lsm6 2541997   NP_594380 68
P.falciparum PF13_0142 814113   XP_001349990 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)