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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. l7Rn6, lethal, Chr 7, Rinchik 6
Sequence ID:NM_026304
Entrez Gene ID:67669
Ensembl ID:ENSMUSG00000062797

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 47.1 cM|7 E1

Chromosomal Position (from UCSC)

Chromosomal Position:7: 89918688 - 89941185

NM_026304 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13199706719897067516
3204389706858297068700
4395909707207397072224
5918289708423697084473
82910459708947897089694

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3485003Full LengthBC003916lethal, Chr 7, Rinchik 6
5693333IncompleteBC083330RIKEN cDNA 0610007P06 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080580  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026304 NP_080580 Q9DD02 DUF775

Related Sequences

 
mRNAGenPeptSwissProt
BC003916 AAH03916 Q9DD02
DQ196315 ABA26460 Q9DD02
DQ196316 ABA26461 Q9DD02
AK002306 BAB22001 Q9DD02
AK012166 BAB28072 Q9DD02

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus l7Rn6 NP_080580 R.norvegicus l7Rn6 293103   NP_001013919 100
H.sapiens C11orf73 51501 Gene Info NP_057485 97
A.gambiae OPI10_ANOGA 1273534   XP_312519 54
D.melanogaster CG13926 38192   NP_647633 49
S.pombe SPBC21H7.06c 2540509   NP_595931 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)