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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Vamp2, vesicle-associated membrane protein 2
Sequence ID:NM_009497
Entrez Gene ID:22318
Ensembl ID:ENSMUSG00000020894

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 69089105 - 69090025

NM_009497 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11006890202968902128
1012216890260768902727
2223806890323268903390
3814326890347768903528
43321646890415168905882

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3156993Full LengthBC039745vesicle-associated membrane protein 2
6596132Full LengthBC055105vesicle-associated membrane protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033523  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009497 NP_033523 P63044 Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
U60150 AAB03463 P63044
AF007168 AAB62931 O35619
BC039745 AAH39745 Q8CHR4
BC055105 AAH55105 P63044
AK090178 BAC41125 P63044

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vamp2 NP_033523 R.norvegicus Vamp2 24803   NP_036795 100
H.sapiens VAMP2 6844 Gene Info NP_055047 99
A.gambiae AgaP_AGAP007721 1269522   XP_001687848 74
D.melanogaster Syb 36080   NP_001137633 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)