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Gene Info

Gene Information For:Mm. Calm1, Calmodulin 1
Sequence ID:NM_009790
Entrez Gene ID:12313
Ensembl ID:ENSMUSG00000001175

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 100199528 - 100207311

NM_009790 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1176101437750101437925
177207101440602101440632
208351101441784101441927
352458101443822101443928
459594101444307101444442
5954001101444609101448015

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6838207Full LengthBC054805calmodulin 1
6815598IncompleteBC058125calmodulin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033920  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009790 NP_033920 P62204 efhand

Related Sequences

 
mRNAGenPeptSwissProt
M19381 AAA66182 P62204
BC054805 AAH54805 P62204
AK004673 BAB23462 P62204
AK013695 BAB28959 P62204
AK088141 BAC40168 P62204
AK145841 BAE26689 Q3UKW2
AK150288 BAE29443 P62204
AK150978 BAE30007 P62204
AK151001 BAE30025 P62204
AK151552 BAE30497 P62204
AK151784 BAE30686 P62204
AK151923 BAE30801 P62204
AK151992 BAE30856 P62204
AK152148 BAE30984 P62204
AK152715 BAE31439 P62204
AK152719 BAE31442 P62204
AK152850 BAE31543 P62204
AK152897 BAE31579 P62204
AK153004 BAE31644 P62204
AK153348 BAE31924 P62204
AK153426 BAE31985 P62204
AK153546 BAE32083 P62204
AK159762 BAE35353 P62204
AK160057 BAE35595 P62204
AK160508 BAE35832 P62204
AK161302 BAE36309 P62204
AK162314 BAE36849 P62204
AK166308 BAE38695 P62204
AK167353 BAE39452 P62204
AK168002 BAE39990 P62204
AK168241 BAE40191 P62204
AK168663 BAE40516 P62204
AK168803 BAE40633 P62204
AK169027 BAE40819 P62204
AK169055 BAE40843 P62204
AK169640 BAE41271 P62204
X61432 CAA43674 P62204

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Calm1 NP_033920 M.musculus Calm3 12315 Gene Info NP_031616 100
M.musculus Calm2 12314 Gene Info NP_031615 100
R.norvegicus Calm2 50663   NP_059022 100
R.norvegicus Calm1 24242   NP_114175 100
R.norvegicus Calm3 24244   NP_036650 100
A.gambiae AgaP_AGAP010957 1271007   XP_309749 99
C.elegans cmd-1 178614   NP_503386 98
D.melanogaster Cam 36329   NP_523710 98
A.thaliana CAM4 842959   NP_176814 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta