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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc52a2, solute carrier protein 52, member 2
Sequence ID:NM_029643
Entrez Gene ID:52710
Ensembl ID:ENSMUSG00000022560

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 D3|15 44.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 76538963 - 76541388

NM_029643 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12537636937276369624
2544737636981276370031
47413597637012376371008
136014837637110176371224
148427007637134376372559

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4921900Full LengthBC016264G protein-coupled receptor 172B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083919  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029643 NP_083919 Q9D8F3 DUF1011

Related Sequences

 
mRNAGenPeptSwissProt
BC016264 AAH16264 Q9D8F3
AK008081 BAB25447 Q9D8F3
AK029579 BAC26522 Q9D8F3
AK032015 BAC27648 Q9D8F3
AK080449 BAC37920 Q9D8F3
AK142597 BAE25123 Q9D8F3
AK152335 BAE31133 Q9D8F3
AK161447 BAE36401 Q9D8F3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc52a2 NP_083919 R.norvegicus Gpr172a 362942   NP_001103140 91
H.sapiens SLC52A2 79581 Gene Info NP_078807 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)