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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Supt5h, suppressor of Ty 5 homolog (S. cerevisiae)
Sequence ID:NM_013676
Entrez Gene ID:20924
Ensembl ID:ENSMUSG00000003435

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 10.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 28324310 - 28329086

 Exon Info From UCSC:
NM_013676

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3496691Full LengthBC007132suppressor of Ty 5 homolog (S. cerevisiae)
5696323Full LengthBC059849suppressor of Ty 5 homolog (S. cerevisiae)
6306109Full LengthBC058598suppressor of Ty 5 homolog (S. cerevisiae)
4925818IncompleteBC057449suppressor of Ty 5 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038704  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013676 NP_038704 O55201 KOW
Supt5

Related Sequences

 
mRNAGenPeptSwissProt
U88539 AAC40052 O55201
BC007132 AAH07132 O55201
BC057449 AAH57449 O55201
BC058598 AAH58598 O55201
BC059849 AAH59849 O55201
AK145117 BAE26244 O55201
AK146055 BAE26864 O55201
AK146453 BAE27184 O55201
AK146583 BAE27278 O55201
AK146650 BAE27330 O55201

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Supt5h NP_038704 H.sapiens SUPT5H 6829 Gene Info NP_001104490 98
A.gambiae AgaP_AGAP005021 4576284   XP_001231045 59
D.melanogaster Spt5 53442   NP_652610 57
C.elegans spt-5 178143   NP_502283 44
S.pombe spt5 2541916   NP_593191 40
A.thaliana GTA2 826391   NP_192575 39
A.thaliana AT2G34210 817982   NP_180968 37
N.crassa NCU06929 3875384   XP_959276 36
S.cerevisiae SPT5 854999   NP_013703 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)