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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Taf10, TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Sequence ID:NM_020024
Entrez Gene ID:24075
Ensembl ID:ENSMUSG00000043866

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F1

Chromosomal Position (from UCSC)

Chromosomal Position:7: 105739451 - 105744339

NM_020024 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
31200112891407112891576
201315112891739112891853
316380112891941112892005
381535112892343112892497
536787112892600112892851

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3667894Full LengthBC031418TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
5713860Full LengthBC080311TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064408  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020024 NP_064408 Q8K0H5 TFIID_30kDa

Related Sequences

 
mRNAGenPeptSwissProt
BC031418 AAH31418 Q8K0H5
BC080311 AAH80311 Q8K0H5
AK047115 BAC32964 Q8K0H5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Taf10 NP_064408 R.norvegicus Taf10 293345   NP_001128207 99
H.sapiens TAF10 6881 Gene Info NP_006275 92
D.melanogaster Taf10b 33468   NP_477418 57
A.thaliana TAFII15 829300   NP_194900 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)