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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stag3, stromal antigen 3
Sequence ID:NM_016964
Entrez Gene ID:50878
Ensembl ID:ENSMUSG00000036928

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 67.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 138280550 - 138312393

 Exon Info From UCSC:
NM_016964

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862032Full LengthBC139010stromal antigen 3
8862033Full LengthBC139011stromal antigen 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058660  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016964 NP_058660 O70576 HEAT
STAG

Related Sequences

 
mRNAGenPeptSwissProt
BC139010 AAI39011 O70576
BC139011 AAI39012 O70576
AK132652 BAE21282 Q3V170
AK145898 BAE26734 Q3UKR7
AK158240 BAE34419 Q3TYZ1
AJ005678 CAA06669 O70576

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stag3 NP_058660 R.norvegicus Stag3 114522   NP_446182 95
H.sapiens STAG3 10734 Gene Info NP_036579 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)