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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Il6ra, interleukin 6 receptor, alpha
Sequence ID:NM_010559
Entrez Gene ID:16194
Ensembl ID:ENSMUSG00000027947

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3 42.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 89870118 - 89871061

NM_010559 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
120638967324589675307
206421638968073089680829
216422338968176589681834
223422808968277089682816
228124228968982389689964
242325898969046389690629
259027748969094389691127
277528988969310889693231
289931358969415889694394
313633438971687689717083

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015515BC148583interleukin 6 receptor, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034689  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010559 NP_034689 P22272 fn3
ig

Related Sequences

 
mRNAGenPeptSwissProt
BC148583 AAI48584  
AK020663 BAB32168  
AK141197 BAE24580 Q3URV7
X51975 CAA36237 P22272
X51976 CAA36238  
X53802 CAA37810 P22272

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Il6ra NP_034689 R.norvegicus Il6r 24499   NP_058716 90
H.sapiens IL6R 3570 Gene Info NP_000556 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta