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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hrh3, histamine receptor H3
Sequence ID:NM_133849
Entrez Gene ID:99296
Ensembl ID:ENSMUSG00000039059

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 180099470 - 180104407

NM_133849 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
371980179834177179836120
19812147179837433179837599
21482468179838606179838926

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130478Full LengthBC132201histamine receptor H3
5361966IncompleteBC028947histamine receptor H3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598610  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133849 NP_598610 Q540P3
P58406
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC028947 AAH28947 Q8K116
BC132201 AAI32202 Q540P3
AY044153 AAK72406 Q540P3
P58406
AY142145 AAN34941 Q540P3
P58406
AK140374 BAE24362 Q3USH0
AK156130 BAE33598 Q3U1A2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hrh3 NP_598610 R.norvegicus Hrh3 85268   NP_445958 99
H.sapiens HRH3 11255 Gene Info NP_009163 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)