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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fam21, family with sequence similarity 21
Sequence ID:NM_026585
Entrez Gene ID:28006
Ensembl ID:ENSMUSG00000024104

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1|6 50.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 116208087 - 116220609

 Exon Info From UCSC:
NM_026585

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6827177Full LengthBC056942DNA segment, Chr 6, Wayne State University 116, expressed
5003134IncompleteBC049979DNA segment, Chr 6, Wayne State University 116, expressed

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026585 NP_080861 Q6PGL7  

Related Sequences

 
mRNAGenPeptSwissProt
BC049979 AAH49979 Q6PGL7
BC056942 AAH56942 Q6PGL7
AK011156 BAB27436 Q9CT54
AK038318 BAC29966 Q6PGL7
AK043764 BAC31648 Q8BRP9
AK122320 BAC65602 Q6PGL7
AK163765 BAE37485 Q6PGL7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus D6Wsu116e NP_080861 R.norvegicus Fam21c 297530   NP_954677 89
H.sapiens FAM21C 253725 Gene Info NP_056077 75
H.sapiens FAM21A 387680 Gene Info NP_001005751 75
D.melanogaster CG16742 37331   NP_611496 29
A.gambiae AgaP_AGAP007833 5668249   XP_001689050 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)