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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Actr1b, ARP1 actin-related protein 1B, centractin beta
Sequence ID:NM_146107
Entrez Gene ID:226977
Ensembl ID:ENSMUSG00000037351

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 B|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 36699199 - 36699843

 Exon Info From UCSC:
NM_146107

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5375425Full LengthBC023020ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
5358219IncompleteBC024861ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
5359062IncompleteBC033420ARP1 actin-related protein 1 homolog B (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666219  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_146107 NP_666219 Q8R5C5 Actin

Related Sequences

 
mRNAGenPeptSwissProt
BC023020 AAH23020 Q8R5C5
BC024861 AAH24861 Q8R1B2
AK088839 BAC40604 Q8R5C5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Actr1b NP_666219 R.norvegicus Actr1b 316333   NP_001034117 100
H.sapiens ACTR1B 10120 Gene Info NP_005726 99
N.crassa NCU04247 3877401   XP_961238 65
S.cerevisiae ARP1 856530   NP_011997 54
S.pombe arp1 2539676   NP_596704 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)