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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nod1, nucleotide-binding oligomerization domain containing 1
Sequence ID:NM_001171007
NM_172729
Entrez Gene ID:107607
Ensembl ID:ENSMUSG00000038058

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 54923947 - 54944591

 Exon Info From UCSC:
NM_001171007
NM_172729

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3597911Full LengthBC042670nucleotide-binding oligomerization domain containing 1
5037914IncompleteBC043670nucleotide-binding oligomerization domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766317  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171007 NP_001164478    
NM_172729 NP_766317 Q8BHB0
Q540J8
CARD
NACHT

Related Sequences

 
mRNAGenPeptSwissProt
BC042670 AAH42670 Q8BHB0
Q540J8
BC043670 AAH43670 Q8BHB0
AY160222 AAN52479 Q8BHB0
Q540J8
AK082663 BAC38566 Q8BHB0
AK089662 BAC40940 Q8BHB0
Q540J8
AK137585 BAE23420 Q8BHB0
Q540J8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nod1 NP_766317 R.norvegicus Nod1 500133   NP_001102706 95
H.sapiens NOD1 10392 Gene Info NP_006083 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)