Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Opn1mw, opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
Sequence ID:NM_008106
Entrez Gene ID:14539
Ensembl ID:ENSMUSG00000031394

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A7.3|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 74127493 - 74150753

NM_008106 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11387137280471372941
1394357137805271378348
4366047138375771383925
6057707138514171385306
77110107138878471389023
101112207139588471396093

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4507311Full LengthBC014826opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032132  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008106 NP_032132 O35599 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF011389 AAB64302 O35599
AF190672 AAG17991 O35599
BC014826 AAH14826 O35599
AK149287 BAE28791 Q3UEX0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Opn1mw NP_032132 R.norvegicus Opn1mw 89810   NP_446000 98
H.sapiens OPN1LW 5956 Gene Info NP_064445 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)