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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slco1c1, solute carrier organic anion transporter family, member 1c1
Sequence ID:NM_001177772
NM_021471
Entrez Gene ID:58807
Ensembl ID:ENSMUSG00000030235

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 G1

Chromosomal Position (from UCSC)

Chromosomal Position:6: 141524416 - 141570177

 Exon Info From UCSC:
NM_001177772
NM_021471

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30360663Full LengthBC078456solute carrier organic anion transporter family, member 1c1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067446  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177772 NP_001171243    
NM_021471 NP_067446 Q9ERB5 OATP
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
AY007379 AAG09622 Q9ERB5
BC078456 AAH78456 Q66L38
AK048926 BAC33495 Q9ERB5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slco1c1 NP_067446 R.norvegicus Slco1c1 84511   NP_445893 95
H.sapiens SLCO1C1 53919 Gene Info NP_059131 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)