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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Wdr61, WD repeat domain 61
Sequence ID:NM_001025375
NM_001025376
NM_023191
Entrez Gene ID:66317
Ensembl ID:ENSMUSG00000061559

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 C

Chromosomal Position (from UCSC)

Chromosomal Position:9: 54717152 - 54734501

 Exon Info From UCSC:
NM_001025375
NM_001025376
NM_023191

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5374890Full LengthBC023026WD repeat domain 61

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020546  NP_001020547  NP_075680  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025375 NP_001020546 Q9ERF3 WD40
NM_001025376 NP_001020547 Q9CWZ4 WD40
NM_023191 NP_075680 Q9ERF3 WD40

Related Sequences

 
mRNAGenPeptSwissProt
AF309554 AAG31640 Q9ERF3
BC023026 AAH23026 Q9ERF3
EF011623 ABK41113 A0MNP4
AK010283 BAB26819 Q9CWZ4
AK012342 BAB28173 Q9ERF3
AK013114 BAB28657 Q9ERF3
AK049527 BAC33795 Q8BKW0
AK077037 BAC36579 Q8BVQ0
AK142498 BAE25087 Q9ERF3
AK153862 BAE32218 Q9ERF3
AK167706 BAE39750 Q9ERF3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wdr61 NP_001020546 R.norvegicus Wdr61 363064   NP_001020914 100
H.sapiens WDR61 80349 Gene Info NP_079510 97
A.gambiae AgaP_AGAP007626 3290403   XP_564611 57
D.melanogaster CG3909 41226   NP_649969 56
A.thaliana VIP3 829105   NP_194712 40
S.pombe rec14 2540221   NP_596145 34
N.crassa NCU03517 3872020   XP_955873 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)