Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sox12, SRY-box containing gene 12
Sequence ID:NM_011438
Entrez Gene ID:20667

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 152394902 - 152395103

NM_011438 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
24436152219347152223781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6833848Full LengthBC067019SRY-box containing gene 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035568  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011438 NP_035568 Q04890 HMG_box

Related Sequences

 
mRNAGenPeptSwissProt
U70442 AAC52860 Q04890
BC067019 AAH67019 Q04890
Z18961 CAA79486 Q04890

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sox12 NP_035568 R.norvegicus Sox12 689988   NP_001162121 98
H.sapiens SOX12 6666 Gene Info NP_008874 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)