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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pdlim2, PDZ and LIM domain 2
Sequence ID:NM_001253736
NM_145978
Entrez Gene ID:213019
Ensembl ID:ENSMUSG00000022090

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D2|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 70164217 - 70177672

Transcript StartTranscript EndChromosomal Start Chromosomal End
376127056402470564599
6137307056589670566013
7318587056746770567594
8599387056777170567850
93910177057102670571104
101811697057126670571417
117012397057152170571590
124013917057414370574294
139214867057501970575113
148715507057741570577478

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4990983Full LengthBC024556PDZ and LIM domain 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666090  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253736 NP_001240665    
NM_145978 NP_666090 Q8R1G6 LIM
PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC024556 AAH24556 Q8R1G6
AK137991 BAE23529 Q3UUU5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdlim2 NP_666090 R.norvegicus Pdlim2 290354   NP_001007623 93
H.sapiens PDLIM2 64236 Gene Info NP_067643 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)