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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apoc2, apolipoprotein C-II
Sequence ID:NM_009695
Entrez Gene ID:11813
Ensembl ID:ENSMUSG00000002992

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 19671584 - 19676758

NM_009695 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
373062025692720257196
3074572025857720258727
4585242025889520258961
5256672026207020262212

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4195301Full LengthBC024697apolipoprotein C-II
5124519Full LengthBC106108apolipoprotein C-II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033825  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009695 NP_033825 Q05020
Q3UJG0
Apo-CII

Related Sequences

 
mRNAGenPeptSwissProt
BC024697 AAH24697 Q05020
Q3UJG0
AK146468 BAE27195 Q05020
Q3UJG0
Z15090 CAA78804 Q05020
Q3UJG0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apoc2 NP_033825 R.norvegicus Apoc2 292697   NP_001078821 78
H.sapiens APOC2 344 Gene Info NP_000474 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)