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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ngfr, nerve growth factor receptor (TNFR superfamily, member 16)
Sequence ID:NM_033217
Entrez Gene ID:18053
Ensembl ID:ENSMUSG00000000120

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 55.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 95570763 - 95587556

NM_033217 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
922789543013995432408
227924399543313395433293
244026929543550495435756
269330529543928795439646
305331949544226695442407
319534099544879795449011

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5367638Full LengthBC038365nerve growth factor receptor (TNFR superfamily, member 16)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_150086  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033217 NP_150086 Q8CFT3 TNFR_c6
Death

Related Sequences

 
mRNAGenPeptSwissProt
AF105292 AAD17943 Q9Z0W1
BC038365 AAH38365 Q8CFT3
AK037248 BAC29775 Q8BYY1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ngfr NP_150086 R.norvegicus Ngfr 24596   NP_036742 96
H.sapiens NGFR 4804 Gene Info NP_002498 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta