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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cnot6l, CCR4-NOT transcription complex, subunit 6-like
Sequence ID:NM_144910
NM_178854
Entrez Gene ID:231464
Ensembl ID:ENSMUSG00000034724

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 96075588 - 96161755

 Exon Info From UCSC:
NM_144910
NM_178854

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3598248Full LengthBC018506CCR4-NOT transcription complex, subunit 6-like
5324028IncompleteBC023923CCR4-NOT transcription complex, subunit 6-like
6410537IncompleteBC060137CCR4-NOT transcription complex, subunit 6-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_849185  NP_659159  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144910 NP_659159 Q8VEG6 LRR_1
Exo_endo_phos
NM_178854 NP_849185 Q8VEG6 LRR_1
Exo_endo_phos

Related Sequences

 
mRNAGenPeptSwissProt
BC018506 AAH18506 Q8VEG6
AK030112 BAC26790 Q8VEG6
AK151728 BAE30646 Q8VEG6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cnot6l NP_849185 R.norvegicus Cnot6l 360917   NP_001101825 100
H.sapiens CNOT6L 246175 Gene Info NP_653172 98
S.pombe ccr4 2538913   NP_587901 46
N.crassa NCU07779 3874847   XP_958700 40
S.cerevisiae CCR4 851212   NP_009381 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)