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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Car9, carbonic anhydrase 9
Sequence ID:NM_139305
Entrez Gene ID:230099
Ensembl ID:ENSMUSG00000028463

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 B1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 43507023 - 43513727

 Exon Info From UCSC:
NM_139305

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129467Full LengthBC120544carbonic anhydrase 9
40129469Full LengthBC120546carbonic anhydrase 9
5328860IncompleteBC057148carbonic anhydrase 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_647466  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_139305 NP_647466 Q8VHB5 EC 4.2.1.1 Carb_anhydrase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC120544 AAI20545 Q8VHB5
Q3UUZ9
EC 4.2.1.1
BC120546 AAI20547 Q3UUZ9  
EF122497 ABL67718 A1ECK8  
AB086322 BAC00816 Q8VHB5 EC 4.2.1.1
AK136579 BAE23060 Q8VHB5
Q3UUZ9
EC 4.2.1.1
AK137719 BAE23474 Q8VHB5
Q3UUZ9
EC 4.2.1.1
AK166403 BAE38755 Q3TLN7  
AJ245857 CAC80975 Q8VHB5
Q3UUZ9
EC 4.2.1.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Car9 NP_647466 R.norvegicus Car9 313495   NP_001101426 91
H.sapiens CA9 768 Gene Info NP_001207 74
D.melanogaster CG18672 50101   NP_652276 38
D.melanogaster CG5379 42625   NP_651033 37
D.melanogaster CG3669 43701   NP_001097987 35
D.melanogaster CG18673 50102   NP_001097988 35
D.melanogaster CG10899 42965   NP_651298 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)