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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ska1, spindle and kinetochore associated complex subunit 1
Sequence ID:NM_001164355
NM_025581
Entrez Gene ID:66468
Ensembl ID:ENSMUSG00000036223

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E2|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 74196777 - 74207779

 Exon Info From UCSC:
NM_001164355
NM_025581

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3709649Full LengthBC019940RIKEN cDNA 2810433K01 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079857  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164355 NP_001157827    
NM_025581 NP_079857   DUF1395

Related Sequences

 
mRNAGenPeptSwissProt
BC019940 AAH19940 Q9CPV1
DQ926863 ABJ15826 Q9CPV1
DQ926864 ABJ15827 Q9CPV1
AK006442 BAB24591 Q9CPV1
AK013233 BAB28731 Q9CPV1
AK021226 BAB32336 Q9CPV1
AK172500 BAE43036 Q9CPV1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ska1 NP_001157827 R.norvegicus Ska1 291441   NP_001099604 86
H.sapiens SKA1 220134 Gene Info NP_001034624 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)