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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tagln, Transgelin
Sequence ID:NM_011526
Entrez Gene ID:21345
Ensembl ID:ENSMUSG00000032085

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.2|9 27.0

Chromosomal Position (from UCSC)

Chromosomal Position:9: 45929971 - 45935897

NM_011526 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18884573771045738597
8899914573891545739017
99211694573938245739559
117013614573966445739855
136215864574391645744140

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3600413Full LengthBC003795transgelin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035656  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008794 NP_032820 Q61139 Peptidase_S8
P_proprotein
NM_011526 NP_035656 P37804 CH
Calponin

Related Sequences

 
mRNAGenPeptSwissProt
L41154 AAA79166 P37804
U48830 AAB09725 Q61139
U36588 AAC52418 P37804
BC003795 AAH03795 P37804
BC006730 AAH06730 Q61139
AK002880 BAB22427 P37804
AK077235 BAC36700 P37804
AK148416 BAE28541 Q61139
AK151980 BAE30847 Q3U920
AK165389 BAE38156 Q61139

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tagln NP_035656 H.sapiens TAGLN 6876 Gene Info NP_001001522 97
R.norvegicus Tagln 25123   NP_113737 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)