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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Med28, mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)
Sequence ID:NM_025895
Entrez Gene ID:66999
Ensembl ID:ENSMUSG00000015804

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 45520304 - 45525568

NM_025895 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12564591146745911722
2573234591367445913740
3244364591466045914772
43745684591639145920522

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4017146Full LengthBC024941mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025895 NP_080171 Q920D3  

Related Sequences

 
mRNAGenPeptSwissProt
BC024941 AAH24941 Q920D3
AF318060 AAL26907 Q920D3
AK003854 BAB23039 Q920D3
AK005681 BAB24184 Q920D3
AK007855 BAB25307 Q920D3
AK154249 BAE32464 Q920D3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Med28 NP_080171 R.norvegicus Med28 305391   NP_001100687 99
H.sapiens MED28 80306 Gene Info NP_079481 94
A.gambiae AgaP_AGAP003867 1271602   XP_310426 45
D.melanogaster MED28 43079   NP_651397 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)