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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Wdr5, WD repeat domain 5
Sequence ID:NM_080848
Entrez Gene ID:140858
Ensembl ID:ENSMUSG00000026917

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 27158250 - 27536538

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4919781Full LengthBC016103WD repeat domain 5
5132525Full LengthBC025801WD repeat domain 5
3591165IncompleteBC008547WD repeat domain 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_543124  

Protein Infomation

NM_080848 NP_543124 P61965 WD40

Related Sequences

BC008547 AAH08547 P61965
BC016103 AAH16103 P61965
BC025801 AAH25801 P61965
AF416510 AAL27006 P61965
AK075937 BAC36067 P61965
AK144091 BAE25694 Q3UNQ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Wdr5 NP_543124 H.sapiens WDR5 11091 Gene Info NP_438172 100
R.norvegicus Wdr5 362093   NP_001034123 100
A.gambiae AgaP_AGAP002019 1281099   XP_321036 92
A.gambiae AgaP_AGAP012731 1268560   XP_307121 92
D.melanogaster wds 53428   NP_524984 91
C.elegans tag-125 175474   NP_497749 70
A.thaliana AT3G49660 824128   NP_190535 67
N.crassa NCU03244 3879885   XP_963736 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)