Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stx12, syntaxin 12
Sequence ID:NM_133887
Entrez Gene ID:100226
Ensembl ID:ENSMUSG00000028879

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.3|4 60.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 132854063 - 132884401

NM_133887 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11495132409978132411472
14961578132413214132413296
15791651132414333132414405
16521757132416458132416563
17581801132418740132418783
18021939132419073132419210
19402039132424082132424181
20402109132427502132427571
21102320132440162132440372

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2645010Full LengthBC010669syntaxin 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598648  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133887 NP_598648 Q9ER00 Syntaxin
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
BC010669 AAH10669 Q9ER00
AB019211 BAB20282 Q9ER00
AK077678 BAC36951 Q9ER00
AK078948 BAC37473 Q9ER00
AK146544 BAE27249 Q9ER00
AK146735 BAE27397 Q9ER00
AK167087 BAE39244 Q9ER00
AK167804 BAE39831 Q3TIL5
AK170203 BAE41633 Q3TDG9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stx12 NP_598648 R.norvegicus Stx12 65033   NP_075228 99
H.sapiens STX12 23673 Gene Info NP_803173 93
C.elegans syn-13 172718   NP_492422 34
A.thaliana SYP21 831546   NP_197185 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)