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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ubr2, Ubiquitin protein ligase E3 component n-recognin 2
Sequence ID:NM_001177374
NM_146078
Entrez Gene ID:224826
Ensembl ID:ENSMUSG00000023977

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 C|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46928297 - 46929708

 Exon Info From UCSC:
NM_001177374
NM_146078

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4935220Full LengthBC031403ubiquitin protein ligase E3 component n-recognin 2
30544183Full LengthBC075642ubiquitin protein ligase E3 component n-recognin 2
4191994IncompleteBC026391ubiquitin protein ligase E3 component n-recognin 2
5253020IncompleteBC025617ubiquitin protein ligase E3 component n-recognin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666190  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177374 NP_001170845    
NM_146078 NP_666190 Q6WKZ8 zf-UBR
ClpS

Related Sequences

 
mRNAGenPeptSwissProt
BC025617 AAH25617 Q6WKZ8
BC026391 AAH26391 Q6WKZ8
BC031403 AAH31403 Q6WKZ8
BC075642 AAH75642 Q6WKZ8
AY061885 AAL32102 Q6WKZ8
AY280958 AAQ17202 Q6WKZ8
AK083320 BAC38864 Q6WKZ8
AK122254 BAC65536 Q6WKZ8
AK143202 BAE25301 Q3UPU3
AK147445 BAE27917 Q3UHE0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ubr2 NP_666190 R.norvegicus Ubr2 363188   XP_002730065 96
H.sapiens UBR2 23304 Gene Info NP_056070 91
A.gambiae AgaP_AGAP000171 1272092   XP_310967 38
D.melanogaster CG9086 32687   NP_573184 37
C.elegans C32E8.11 171953   NP_491231 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)