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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cct5, chaperonin containing Tcp1, subunit 5 (epsilon)
Sequence ID:NM_007637
Entrez Gene ID:12465
Ensembl ID:ENSMUSG00000022234

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 B3.2

Chromosomal Position (from UCSC)

Chromosomal Position:15: 31590814 - 31601761

 Exon Info From UCSC:
NM_007637

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30537966Full LengthBC094427chaperonin containing Tcp1, subunit 5 (epsilon)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031663  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007637 NP_031663 P80316 Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
BC094427 AAH94427 P80316
AK088184 BAC40194 P80316
AK129056 BAC97866 P80316
AK133857 BAE21891 P80316
AK136493 BAE23007 P80316
AK145445 BAE26441 P80316
AK146405 BAE27146 P80316
AK146425 BAE27159 P80316
AK150390 BAE29518 P80316
AK153911 BAE32250 P80316
AK167895 BAE39906 P80316
Z31555 CAA83430 P80316

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cct5 NP_031663 R.norvegicus Cct5 294864   NP_001004078 98
H.sapiens CCT5 22948 Gene Info NP_036205 96
A.gambiae AgaP_AGAP008249 1277732   XP_317219 70
D.melanogaster Cct5 36308   NP_523707 70
A.thaliana AT1G24510 839066   NP_173859 69
N.crassa NCU03980 3872712   XP_956565 69
S.pombe cct5 2542868   NP_593277 69
C.elegans cct-5 175588   NP_741117 68
S.cerevisiae CCT5 853527   NP_012598 61
P.falciparum PFC0900w 814517   XP_001351273 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)