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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Acly, ATP citrate lyase
Sequence ID:NM_001199296
Entrez Gene ID:104112
Ensembl ID:ENSMUSG00000020917

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 100477201 - 100523622

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6850252Full LengthBC056378ATP citrate lyase
3496817IncompleteBC005533ATP citrate lyase
5346507IncompleteBC021502ATP citrate lyase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598798  

Protein Infomation

NM_001199296 NP_001186225      
NM_134037 NP_598798 Q91V92 EC Ligase_CoA

Related Sequences

BC005533 AAH05533 Q99K05  
BC021502 AAH21502 Q8VDM8  
BC056378 AAH56378 Q91V92 EC
BC065805 AAH65805 Q6P063  
AF332051 AAK56080 Q91V92 EC
AF332052 AAK56081 Q91V92 EC
AK132755 BAE21336 Q3V117  
AK136812 BAE23135 Q3UVY4  
AK149660 BAE29010 Q3UEA1  
AK162364 BAE36874 Q3TS02  
AK169703 BAE41315 Q3TED3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Acly NP_598798 R.norvegicus Acly 24159   NP_058683 100
H.sapiens ACLY 47 Gene Info NP_001087 98
D.melanogaster ATPCL 36760   NP_725514 71
A.gambiae AgaP_AGAP010156 1279572   XP_319323 70
S.pombe SPBC1703.07 2539879   NP_596202 65
N.crassa NCU06785 3879766   XP_963626 64
C.elegans B0365.1 179795   NP_506267 63
C.elegans D1005.1 180485   NP_508280 62
A.thaliana ACLB-1 819845   NP_187317 54
A.thaliana ACLB-2 835006   NP_199757 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta