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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Crot, carnitine O-octanoyltransferase
Sequence ID:NM_023733
Entrez Gene ID:74114
Ensembl ID:ENSMUSG00000003623

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 8966047 - 8997146

 Exon Info From UCSC:
NM_023733

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3156501Full LengthBC006593carnitine O-octanoyltransferase
3500167Full LengthBC012308carnitine O-octanoyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076222  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_023733 NP_076222 Q9DC50 EC 2.3.1.137 Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF144397 AAD55365 Q9QZZ3  
BC006593 AAH06593 Q9DC50 EC 2.3.1.137
BC012308 AAH12308 Q9DC50 EC 2.3.1.137
AK004567 BAB23378 Q9DC50 EC 2.3.1.137
AK037973 BAE20525 Q3V3N1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Crot NP_076222 R.norvegicus Crot 83842   NP_114193 94
H.sapiens CROT 54677 Gene Info NP_001137407 86
A.gambiae AgaP_AGAP002329 1273639   XP_312640 35
C.elegans F41E7.6 185624   NP_509729 35
C.elegans T20B3.1 180126   NP_507245 35
D.melanogaster CG12428 43332   NP_651583 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)