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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Snx4, sorting nexin 4
Sequence ID:NM_080557
Entrez Gene ID:69150
Ensembl ID:ENSMUSG00000022808

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 33251414 - 33298658

 Exon Info From UCSC:
NM_080557

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2644991Full LengthBC016599sorting nexin 4
6512558Full LengthBC050851sorting nexin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542124  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080557 NP_542124 Q91YJ2 PX

Related Sequences

 
mRNAGenPeptSwissProt
BC016599 AAH16599 Q91YJ2
BC050851 AAH50851 Q80X54
AK135356 BAE22501 Q91YJ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snx4 NP_542124 R.norvegicus Snx4 360725   NP_001121022 97
H.sapiens SNX4 8723 Gene Info NP_003785 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)