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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cnppd1, cyclin Pas1/PHO80 domain containing 1
Sequence ID:NM_026977
Entrez Gene ID:69171
Ensembl ID:ENSMUSG00000033159

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 75135770 - 75136839

NM_026977 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117187513178875133505
171918367513389975134016
183718987513432875134389
189920277513592075136048
202821487513613275136252
214922307513639475136475
223123397513747175137579
234024277513798975138076
242827387513863175138941

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5126467Full LengthBC028815RIKEN cDNA 1810031K17 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026977 NP_081253 Q8K158  

Related Sequences

 
mRNAGenPeptSwissProt
BC013714 AAH13714 Q05DI8
BC028815 AAH28815 Q8K158
AK007667 BAB25174 Q9CVK8
AK029090 BAC26289 Q8K158
AK145962 BAE26787 Q3UKL4
AK159252 BAE34933 Q3TXI3
AK169779 BAE41361 Q8K158

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 1810031K17Rik NP_081253 R.norvegicus Cnppd1 316530   NP_954543 92
H.sapiens CNPPD1 27013 Gene Info NP_056495 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)