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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gja5, gap junction protein, alpha 5
Sequence ID:NM_001271628
NM_008121
Entrez Gene ID:14613
Ensembl ID:ENSMUSG00000057123

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.1|3 45.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 96904692 - 97077416

Transcript StartTranscript EndChromosomal Start Chromosomal End
1709683633896836407
7131099685451896857556

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6401526Full LengthBC053054gap junction membrane channel protein alpha 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032147  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271628 NP_001258557    
NM_008121 NP_032147 Q01231 Connexin

Related Sequences

 
mRNAGenPeptSwissProt
BC053054 AAH53054 Q01231
AY390401 AAQ93034 Q6TPI9
AK038780 BAC30131 Q8CAG8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gja5 NP_032147 R.norvegicus Gja5 50563   NP_062153 93
H.sapiens GJA5 2702 Gene Info NP_005257 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)