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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apobec2, apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
Sequence ID:NM_009694
Entrez Gene ID:11811
Ensembl ID:ENSMUSG00000040694

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 C|17 24.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 48419230 - 48432719

NM_009694 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14034855855548558957
4049684856226548562829
96912184857180348572052

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1433092Full LengthBC027530apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033824  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009694 NP_033824 Q9WV35 APOBEC_C
APOBEC_N

Related Sequences

 
mRNAGenPeptSwissProt
AF161699 AAD45361 Q9WV35
BC027530 AAH27530 Q9WV35

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apobec2 NP_033824 R.norvegicus Apobec2 301226   NP_001100353 99
H.sapiens APOBEC2 10930 Gene Info NP_006780 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)