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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Katna1, katanin p60 (ATPase-containing) subunit A1
Sequence ID:NM_011835
Entrez Gene ID:23924
Ensembl ID:ENSMUSG00000019794

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 A1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 7726021 - 7763149

 Exon Info From UCSC:
NM_011835

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3597742Full LengthBC009136katanin p60 (ATPase-containing) subunit A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035965  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011835 NP_035965 Q9WV86 EC 3.6.4.3 AAA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF153197 AAD42087 Q9WV86 EC 3.6.4.3
BC009136 AAH09136 Q9WV86 EC 3.6.4.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Katna1 NP_035965 R.norvegicus Katna1 292464   NP_001004217 96
H.sapiens KATNA1 11104 Gene Info NP_008975 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)