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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cyth3, cytohesin 3
Sequence ID:NM_001163548
NM_011182
Entrez Gene ID:19159
Ensembl ID:ENSMUSG00000018001

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 82.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 143622592 - 143707905

 Exon Info From UCSC:
NM_001163548
NM_011182

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3969080Full LengthBC035296cytohesin 3
3592498IncompleteBC007189cytohesin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035312  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163548 NP_001157020    
NM_011182 NP_035312 Q8CBE4 PH
Sec7

Related Sequences

 
mRNAGenPeptSwissProt
AF084221 AAF23858 O08967
Q3TXK1
BC007189 AAH07189 Q922J4
BC035296 AAH35296 O08967
Q3TXK1
AB013470 BAA33433 O08967
Q3TXK1
AK036191 BAC29342 Q8CBE4
AK220565 BAD90330 Q5DTF5
AK142407 BAE25057 O08967
Q3TXK1
AK159229 BAE34915 O08967
Q3TXK1
AK168566 BAE40437 Q3TGW1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cyth3 NP_035312 R.norvegicus Cyth3 116693   NP_446364 100
H.sapiens CYTH3 9265 Gene Info NP_004218 99
C.elegans grp-1 176140   NP_498764 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta