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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ercc1, excision repair cross-complementing rodent repair deficiency, complementation group 1
Sequence ID:NM_001127324
Entrez Gene ID:13870
Ensembl ID:ENSMUSG00000003549

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 19345099 - 19356524

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4039274Full LengthBC011224excision repair cross-complementing rodent repair deficiency, complementation group 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031974  

Protein Infomation

NM_001127324 NP_001120796    
NM_007948 NP_031974 P07903 HHH

Related Sequences

BC011224 AAH11224 P07903
AK088271 BAC40249 P07903
AK136733 BAE23112 P07903
X07414 CAA30310 P07903

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ercc1 NP_031974 R.norvegicus Ercc1 292673   NP_001099698 91
H.sapiens ERCC1 2067 Gene Info NP_001974 86
A.thaliana ERCC1 819685   NP_187172 51
D.melanogaster Ercc1 36654   NP_477468 50
S.pombe swi10 2540887   NP_596115 48
A.gambiae AgaP_AGAP004029 1278845   XP_318485 47
N.crassa NCU07066 3876480   XP_960331 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)