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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Sbds, Shwachman-Bodian-Diamond syndrome homolog (human)
Sequence ID:NM_023248
Entrez Gene ID:66711
Ensembl ID:ENSMUSG00000025337

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G1.3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 130245733 - 130255438

NM_023248 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3599733Full LengthBC003849Shwachman-Bodian-Diamond syndrome homolog (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075737  

Protein Infomation

NM_023248 NP_075737 P70122 SBDS

Related Sequences

BC003849 AAH03849 P70122
AK005079 BAB23803 P70122
AK014648 BAB29487 P70122
AK019228 BAB31612 P70122
AK168847 BAE40670 P70122
X99668 CAA67982 P70122

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Sbds NP_075737 R.norvegicus Sbds 288615   NP_001008290 99
H.sapiens SBDS 51119 Gene Info NP_057122 97
A.gambiae AgaP_AGAP007882 3291609   XP_317609 67
D.melanogaster CG8549 38749   NP_648057 60
C.elegans sbds-1 175218   NP_497226 58
A.thaliana AT1G43860 840982   NP_564488 53
S.pombe SPAC4F8.03 2543459   NP_593869 51
N.crassa NCU00476 3872942   XP_956795 50
S.cerevisiae SDO1 850709   NP_013122 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)