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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hist3h2ba, histone cluster 3, H2ba
Sequence ID:NM_030082
Entrez Gene ID:78303
Ensembl ID:ENSMUSG00000056895

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 B2

Chromosomal Position (from UCSC)

Chromosomal Position:11: 58948910 - 58949530

NM_030082 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16205876241258763031

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5684450Full LengthBC051921histone cluster 3, H2ba

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084358  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030082 NP_084358 Q9D2U9 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC051921 AAH51921 Q9D2U9
AK018765 BAB31395 Q9D2U9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hist3h2ba NP_084358 R.norvegicus Hist3h2ba 303175   NP_001104597 100
S.cerevisiae HTB2 852284   NP_009553 73
S.pombe htb1 2539523   NP_588181 72
A.thaliana AT3G53650 824533   NP_190933 70
A.thaliana AT2G37470 818324   NP_181283 70
S.cerevisiae HTB1 851810   NP_010510 70
N.crassa NCU02435 3875587   XP_959440 70
A.thaliana AT3G09480 820105   NP_187559 69
A.thaliana AT5G02570 831878   NP_195877 68
P.falciparum PF07_0054 2655098   XP_001349046 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)