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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. S100a11, S100 calcium binding protein A11 (calgizzarin)
Sequence ID:NM_016740
Entrez Gene ID:20195
Ensembl ID:ENSMUSG00000027907

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 E-F

Chromosomal Position (from UCSC)

Chromosomal Position:3: 93520496 - 93526286

NM_016740 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1589332441793324474
592079332797293328120
2085049332991393330209

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4913795Full LengthBC021916S100 calcium binding protein A11 (calgizzarin)
6764162Full LengthBC086903S100 calcium binding protein A11 (calgizzarin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058020  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016740 NP_058020 P50543 efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
U41341 AAA85181 P50543
BC021916 AAH21916 P50543
BC086903 AAH86903 P50543
AK002490 BAB22139 P50543
AK003889 BAB23059 P50543
AK164352 BAE37754 P50543

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus S100a11 NP_058020 M.musculus Gm12854 100502897 Gene Info XP_003084639 99
R.norvegicus S100a11 445415   NP_001004095 94
H.sapiens S100A11 6282 Gene Info NP_005611 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)