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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Hmgb2, high mobility group box 2
Sequence ID:NM_008252
Entrez Gene ID:97165
Ensembl ID:ENSMUSG00000054717

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B2|8 31.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 57511937 - 57514487

NM_008252 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3489780Full LengthBC002050high mobility group box 2
5320702Full LengthBC083108high mobility group box 2
5693598Full LengthBC046759high mobility group box 2

Protein Infomation

NM_008252 NP_032278 P30681  

Related Sequences

BC002050 AAH02050 Q3U566
BC046759 AAH46759 P30681
BC083108 AAH83108 P30681
AK003773 BAB22988 P30681
AK008443 BAB25672 P30681
AK011467 BAB27638 Q9CT19
AK012568 BAB28323 P30681
AK135296 BAE22481 P30681
AK135297 BAE22482 P30681
AK146212 BAE26982 P30681
AK151164 BAE30167 Q3UAZ7
AK153858 BAE32214 Q3U566
X67668 CAA47900 P30681
Z46757 CAA86727 P30681

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Hmgb2 NP_032278 H.sapiens HMGB2 3148 Gene Info NP_001124160 97
R.norvegicus Hmgb2 29395   NP_058883 97
R.norvegicus RGD1564519 498072   XP_573272 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta