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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nedd4, neural precursor cell expressed, developmentally down-regulated 4
Sequence ID:NM_010890
Entrez Gene ID:17999
Ensembl ID:ENSMUSG00000032216

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 D|9 40.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 72662481 - 72720787

 Exon Info From UCSC:
NM_010890

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861835Full LengthBC138813neural precursor cell expressed, developmentally down-regulated 4
3962876IncompleteBC080710neural precursor cell expressed, developmentally down-regulted gene 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035020  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010890 NP_035020 P46935 C2
WW
HECT

Related Sequences

 
mRNAGenPeptSwissProt
U96635 AAB63360 P46935
BC127070 AAI27071 A0JNZ0
BC138813 AAI38814 B2RSC8
D85414 BAA12803 P46935
AK080349 BAC37885 Q8BNU7
AK088620 BAC40458 P46935
AK088767 BAC40558 P46935
AK122203 BAC65485 P46935
AK050517 BAE20674 Q3V335
AK133838 BAE21875 P46935
AK160570 BAE35880 Q3TUU1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nedd4 NP_035020 R.norvegicus Nedd4 25489   NP_037118 97
A.gambiae AgaP_AGAP000787 1272379   XP_311327 60
D.melanogaster Nedd4 39958   NP_648993 58
C.elegans Y92H12A.2 171719   NP_490865 51
S.pombe pub3 2539956   NP_595793 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)