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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tjp3, Tight junction protein 3
Sequence ID:NM_013769
Entrez Gene ID:27375
Ensembl ID:ENSMUSG00000034917

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 81273227 - 81291234

 Exon Info From UCSC:
NM_013769

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3600848Full LengthBC012518tight junction protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038797  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013769 NP_038797 Q9QXY1 PDZ
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
AF157006 AAF24175 Q9QXY1
BC012518 AAH12518 Q921G9
AK029083 BAC26285 Q921G9
AK134100 BAE22013 Q3UZ47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tjp3 NP_038797 R.norvegicus Tjp3 314640   NP_001101543 94
H.sapiens TJP3 27134 Gene Info NP_055243 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)